spamosaic.utils.plot_basis

spamosaic.utils.plot_basis(ad, basis, color, **kwargs)[source]

Wrapper for Scanpy’s sc.pl.embedding with warning suppression.

Parameters:
  • ad (AnnData) – Annotated data object.

  • basis (str) – Key of embedding (e.g., ‘umap’).

  • color (str) – Variable in .obs to color by.

  • **kwargs – Additional plotting arguments.